Lamindb

- ♻️ Make `suffix` non-nullable and root unique [PR1090](https://github.com/laminlabs/lamindb/pull/1090) [falexwolf](https://github.com/falexwolf)
- ♻️ Add `view_lineage` to `Dataset` [PR1089](https://github.com/laminlabs/lamindb/pull/1089) [falexwolf](https://github.com/falexwolf)
- 🚸 Disable creating non-validated records with `from_values` [PR1086](https://github.com/laminlabs/lamindb/pull/1086) [sunnyosun](https://github.com/sunnyosun)
- ♻️ Enable passing AnnData-like `File` object to `Dataset.from_anndata` [PR1085](https://github.com/laminlabs/lamindb/pull/1085) [falexwolf](https://github.com/falexwolf)
- 🔊 More consistent logging of inspect [PR1081](https://github.com/laminlabs/lamindb/pull/1081) [sunnyosun](https://github.com/sunnyosun)
- 🔥 Remove `inherit_relations` [PR1079](https://github.com/laminlabs/lamindb/pull/1079) [sunnyosun](https://github.com/sunnyosun)
- ♻️ Use `CanValidate` & `HasParents` [PR1078](https://github.com/laminlabs/lamindb/pull/1078) [falexwolf](https://github.com/falexwolf)
- 👷 Main is the new staging, release the new production branch [PR1077](https://github.com/laminlabs/lamindb/pull/1077) [falexwolf](https://github.com/falexwolf)
- ♻️ Refactor tutorial [PR1076](https://github.com/laminlabs/lamindb/pull/1076) [falexwolf](https://github.com/falexwolf)
- ♻️ Add `transform`, `run` & `input_of` to `Dataset` [PR1074](https://github.com/laminlabs/lamindb/pull/1074) [falexwolf](https://github.com/falexwolf)
- 🚸 Better UX of graphviz installation [PR1075](https://github.com/laminlabs/lamindb/pull/1075) [sunnyosun](https://github.com/sunnyosun)
- 👷 Run tutorial on anonymous worker [PR1073](https://github.com/laminlabs/lamindb/pull/1073) [falexwolf](https://github.com/falexwolf)
- ♻️ Use `create_path` [PR1072](https://github.com/laminlabs/lamindb/pull/1072) [falexwolf](https://github.com/falexwolf)
- 🎨 Make `from_values` synonyms aware, `inspect` bionty aware [PR1066](https://github.com/laminlabs/lamindb/pull/1066) [sunnyosun](https://github.com/sunnyosun)
- ♻️ Use principled conversion to paths with options inheritance [PR1069](https://github.com/laminlabs/lamindb/pull/1069) [Koncopd](https://github.com/Koncopd)
- ♻️ Refactor storage [PR1067](https://github.com/laminlabs/lamindb/pull/1067) [falexwolf](https://github.com/falexwolf)
- 🐛 Fix tree view for anonymous access [PR1065](https://github.com/laminlabs/lamindb/pull/1065) [falexwolf](https://github.com/falexwolf)
- 🍱 Add the Iris images dev dataset [PR1062](https://github.com/laminlabs/lamindb/pull/1062) [falexwolf](https://github.com/falexwolf)
- 🚚 `Dataset.from_files` replaced with default constructor [PR1060](https://github.com/laminlabs/lamindb/pull/1060) [falexwolf](https://github.com/falexwolf)
- 🍱 Added `populate_registries` to some datasets [PR1061](https://github.com/laminlabs/lamindb/pull/1061) [sunnyosun](https://github.com/sunnyosun)
- ✨ Add `get_feature_set` to `.features` accessor [PR1057](https://github.com/laminlabs/lamindb/pull/1057) [sunnyosun](https://github.com/sunnyosun)
- 🚸 Allow `reference` & `reference_type` params in `ln.track()` [PR1053](https://github.com/laminlabs/lamindb/pull/1053) [falexwolf](https://github.com/falexwolf)

- ♻️ Refactor `run_context` [PR1030](https://github.com/laminlabs/lamindb/pull/1030) [falexwolf](https://github.com/falexwolf)
- 🚸 Remove SA as a dependency and use delete dialogue [PR1041](https://github.com/laminlabs/lamindb/pull/1041) [falexwolf](https://github.com/falexwolf)
- 🚚 Move data lineage to use cases [PR1026](https://github.com/laminlabs/lamindb/pull/1026) [falexwolf](https://github.com/falexwolf)
- 🚸 Do not allow creating files with none of `key`, `description` and `run` [PR1022](https://github.com/laminlabs/lamindb/pull/1022) [falexwolf](https://github.com/falexwolf)
- ♻️ Introduce `ParentsAware` [PR1023](https://github.com/laminlabs/lamindb/pull/1023) [sunnyosun](https://github.com/sunnyosun)
- ♻️ Re-enable file versioning [PR1014](https://github.com/laminlabs/lamindb/pull/1014) [PR1018](https://github.com/laminlabs/lamindb/pull/1018) [falexwolf](https://github.com/falexwolf)
- 🔊 Fix validate logging [PR1017](https://github.com/laminlabs/lamindb/pull/1017) [sunnyosun](https://github.com/sunnyosun)
- ✨ Add `InspectResult` [PR1012](https://github.com/laminlabs/lamindb/pull/1012) [sunnyosun](https://github.com/sunnyosun)
- 🚚 Rename `map_synonyms()` to `standardize()` [PR1046](https://github.com/laminlabs/lamindb/pull/1046) [sunnyosun](https://github.com/sunnyosun)
- 💄 Improved logging & visualizations [PR1011](https://github.com/laminlabs/lamindb/pull/1011) [sunnyosun](https://github.com/sunnyosun)

- 🚸 Introduce Label validation [PR1006](https://github.com/laminlabs/lamindb/pull/1006) [falexwolf](https://github.com/falexwolf)
- 🚸 Turn `File.path()` into property [PR1008](https://github.com/laminlabs/lamindb/pull/1008) [falexwolf](https://github.com/falexwolf)
- 🔥 Remove backward compat for auto-keyed paths [PR1007](https://github.com/laminlabs/lamindb/pull/1007) [falexwolf](https://github.com/falexwolf)
- ✨ Add `ValidationAware.validate()` [PR1000](https://github.com/laminlabs/lamindb/pull/1000) [sunnyosun](https://github.com/sunnyosun)
- 🚸 Increase default verbosity to hint-level [PR1005](https://github.com/laminlabs/lamindb/pull/1005) [falexwolf](https://github.com/falexwolf)
- ♻️ Better treatment of suffixes [PR1004](https://github.com/laminlabs/lamindb/pull/1004) [falexwolf](https://github.com/falexwolf)
- 🍱 Add nf-core rna-seq test dataset [PR1002](https://github.com/laminlabs/lamindb/pull/1002) [falexwolf](https://github.com/falexwolf)
- 🚚 Move `add_labels` and `get_labels` from `FeatureManager` to `Data` [PR999](https://github.com/laminlabs/lamindb/pull/999) [falexwolf](https://github.com/falexwolf)
- 🚚 Rename `FeatureSet.ref_field` to `FeatureSet.registry` [PR997](https://github.com/laminlabs/lamindb/pull/997) [falexwolf](https://github.com/falexwolf)
- 🚸 Ignore `synonyms` in `from_values` to incentivize explicit curation process [PR993](https://github.com/laminlabs/lamindb/pull/993) [falexwolf](https://github.com/falexwolf)
- 🚚 Move `tutorial1` one level down [PR989](https://github.com/laminlabs/lamindb/pull/989) [falexwolf](https://github.com/falexwolf)
- 🚸 Only link validated features [PR987](https://github.com/laminlabs/lamindb/pull/987) [falexwolf](https://github.com/falexwolf)
- ✅ More fixes and tests for backed [PR988](https://github.com/laminlabs/lamindb/pull/988) [Koncopd](https://github.com/Koncopd)
- 🚚 Move biology notebooks to `lamin-usecases` [PR985](https://github.com/laminlabs/lamindb/pull/985) [sunnyosun](https://github.com/sunnyosun)
- 📝 Improve API layout & description [PR986](https://github.com/laminlabs/lamindb/pull/986) [falexwolf](https://github.com/falexwolf)
- 🚚 Rename `Manager` to `QueryManager` [PR984](https://github.com/laminlabs/lamindb/pull/984) [falexwolf](https://github.com/falexwolf)
- 🚚 Rename `ORM` to `Registry` [PR982](https://github.com/laminlabs/lamindb/pull/982) [sunnyosun](https://github.com/sunnyosun)

- 🔧 Eliminate index files & upper bound pydantic and other core dependencies by major versions [PR981](https://github.com/laminlabs/lamindb/pull/981) [falexwolf](https://github.com/falexwolf)

- ♻️ Refactor storage root management [PR973](https://github.com/laminlabs/lamindb/pull/973) [falexwolf](https://github.com/falexwolf)
- 🎨 Make `add_feature_set` acid [PR980](https://github.com/laminlabs/lamindb/pull/980) [sunnyosun](https://github.com/sunnyosun)
- 📝 Simplify tutorial [PR977](https://github.com/laminlabs/lamindb/pull/977) [sunnyosun](https://github.com/sunnyosun)
- 🐛 Account for `universal_pathlib` 0.1 release [PR976](https://github.com/laminlabs/lamindb/pull/976) [Koncopd](https://github.com/Koncopd)