Lamindb

🚚 Replace `lnschema-wetlab` with `lnbase-biolab` and `lnschema-lamin1` | [651](https://github.com/laminlabs/lamindb/pull/651) | [falexwolf](https://github.com/falexwolf) | 2023-04-22 |
📝 Add an export example for `ln.schema.view()` | [649](https://github.com/laminlabs/lamindb/pull/649) | [falexwolf](https://github.com/falexwolf) | 2023-04-21 |
🐛 Fix population of `transform_id` in `File` in edge cases | [648](https://github.com/laminlabs/lamindb/pull/648) | [falexwolf](https://github.com/falexwolf) | 2023-04-21 | 0.38.3
🚸 Allow registering local postgres instances on the hub | [647](https://github.com/laminlabs/lamindb/pull/647) | [falexwolf](https://github.com/falexwolf) | 2023-04-21 | 0.38.2
🚸 Improve error message for notebook tracking | [643](https://github.com/laminlabs/lamindb/pull/643) | [falexwolf](https://github.com/falexwolf) | 2023-04-19 |
van -> can | [641](https://github.com/laminlabs/lamindb/pull/641) | [ThomVett](https://github.com/ThomVett) | 2023-04-19 |
⚡ Improved feature parsing speed | [640](https://github.com/laminlabs/lamindb/pull/640) | [sunnyosun](https://github.com/sunnyosun) | 2023-04-19 | 0.38.1
⬆️ Compatibility with new hub | [639](https://github.com/laminlabs/lamindb/pull/639) | [falexwolf](https://github.com/falexwolf) | 2023-04-18 | 0.38.0
💥 New calling patterns for lnschema-bionty | [633](https://github.com/laminlabs/lamindb/pull/633) | [falexwolf](https://github.com/falexwolf) | 2023-04-18 |
✅ Use nbproject-test directly | [638](https://github.com/laminlabs/lamindb/pull/638) | [Koncopd](https://github.com/Koncopd) | 2023-04-18 |
🚸 Use relative path in key | [636](https://github.com/laminlabs/lamindb/pull/636) | [falexwolf](https://github.com/falexwolf) | 2023-04-18 | 0.37.2
🩹 Unpack `notebook_path` correctly | [632](https://github.com/laminlabs/lamindb/pull/632) | [Koncopd](https://github.com/Koncopd) | 2023-04-17 | 0.37.1
🚚 Better names, more relationships directly on `File` <span class="badge badge-warning">Breaking</span> | [631](https://github.com/laminlabs/lamindb/pull/631) | [falexwolf](https://github.com/falexwolf) | 2023-04-16 | 0.37.0
✨ Add Google Colab integration | [628](https://github.com/laminlabs/lamindb/pull/628) | [falexwolf](https://github.com/falexwolf) | 2023-04-16 |
🚸 Improve notebook tracking UX | [627](https://github.com/laminlabs/lamindb/pull/627) | [falexwolf](https://github.com/falexwolf) | 2023-04-14 |

🐛 Fix initialization of new notebooks | [623](https://github.com/laminlabs/lamindb/pull/623) | [Koncopd](https://github.com/Koncopd) | 2023-04-10 | 0.36.1

🚸 More robust ontology version tracking | [605](https://github.com/laminlabs/lamindb/pull/605) | [Zethson](https://github.com/Zethson) | 2023-04-01 |
🚚 Import `lnschema_bionty` instead of `bionty` | [591](https://github.com/laminlabs/lamindb/pull/591) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-28 | 0.35.5
🚚 Move all core entities to root level | [590](https://github.com/laminlabs/lamindb/pull/590) | [falexwolf](https://github.com/falexwolf) | 2023-03-27 | 0.35.4
🚸 Polish guide | [589](https://github.com/laminlabs/lamindb/pull/589) | [falexwolf](https://github.com/falexwolf) | 2023-03-27 | 0.35.3
🚚 Move `Readout` from `lnschema-wetlab` to `lnschema-bionty` | [588](https://github.com/laminlabs/lamindb/pull/588) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-27 | 0.35.2
♻️ Fix `parsing_id` | [587](https://github.com/laminlabs/lamindb/pull/587) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-27 | 0.35.1
🚚 Rename `DObject` to `File` and `DFolder` to `Folder` <span class="badge badge-warning">Breaking</span> | [586](https://github.com/laminlabs/lamindb/pull/586) | [falexwolf](https://github.com/falexwolf) | 2023-03-25 | 0.35.0
🚚 Introduce `ln.track()` to replace `ln.nb.header()` | [585](https://github.com/laminlabs/lamindb/pull/585) | [falexwolf](https://github.com/falexwolf) | 2023-03-24 |
🏗️ Combine `Notebook` and `Pipeline` into `Transform` <span class="badge badge-warning">Breaking</span> | [584](https://github.com/laminlabs/lamindb/pull/584) | [falexwolf](https://github.com/falexwolf) | 2023-03-23 |
🚑 Fix optional dependencies | [583](https://github.com/laminlabs/lamindb/pull/583) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-22 | 0.34.2
🔥 Remove `Usage` | [581](https://github.com/laminlabs/lamindb/pull/581) | [falexwolf](https://github.com/falexwolf) | 2023-03-22 |
⬆️ Updated `CellMarker` asset | [578](https://github.com/laminlabs/lamindb/pull/578) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-21 | 0.34.1
⬆️ Upgrade to `bionty` 0.9 | [575](https://github.com/laminlabs/lamindb/pull/575) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-20 | 0.34.0
♻️ Move storage-related code to `lndb-storage` | [560](https://github.com/laminlabs/lamindb/pull/560) | [Koncopd](https://github.com/Koncopd) | 2023-03-20 |
🚑 Fix gene id | [573](https://github.com/laminlabs/lamindb/pull/573) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-17 |
🐛 Check if env variable exists before trying to get his value | [572](https://github.com/laminlabs/lamindb/pull/572) | [fredericenard](https://github.com/fredericenard) | 2023-03-15 |
🚸 Do not yet show deprecation warning for `ln.nb.header()` | [commit](https://github.com/laminlabs/lamindb/commit/2bb80c546434e37b2fa2b0c5b38c92a379aff793) | [falexwolf](https://github.com/falexwolf) | 2023-03-15 | 0.33.4
👷 Restore streaming test from cloud | [569](https://github.com/laminlabs/lamindb/pull/569) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-15 | 0.33.3
⬇️ typeguard<3.0.0 | [568](https://github.com/laminlabs/lamindb/pull/568) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-15 |
➖ Remove typeguard dependency | [567](https://github.com/laminlabs/lamindb/pull/567) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-15 | 0.33.2
⬆️ Update core | [566](https://github.com/laminlabs/lamindb/pull/566) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-15 | 0.33.1

🚸 Smart about `global_context` and `load_latest` when run from notebook | [563](https://github.com/laminlabs/lamindb/pull/563) | [falexwolf](https://github.com/falexwolf) | 2023-03-14 |
✨ `ln.Features` | [562](https://github.com/laminlabs/lamindb/pull/562) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-14 |
🏗️ Introduce `lamindb.context` and enable `ln.Run` to create contexts | [561](https://github.com/laminlabs/lamindb/pull/561) | [falexwolf](https://github.com/falexwolf) | 2023-03-13 |
📝 Improve the docstrings of `ln.save` and `ln.delete` | [559](https://github.com/laminlabs/lamindb/pull/559) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-10 |
📝 Hide CI related cells in notebooks | [558](https://github.com/laminlabs/lamindb/pull/558) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-10 |
📝 Update docs to clarify sign up and log in | [557](https://github.com/laminlabs/lamindb/pull/557) | [lawrlee](https://github.com/lawrlee) | 2023-03-10 |
📝 Prettier species query | [555](https://github.com/laminlabs/lamindb/pull/555) | [falexwolf](https://github.com/falexwolf) | 2023-03-09 | 0.32.0
📝 Refactor docs sidebar | [553](https://github.com/laminlabs/lamindb/pull/553) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-09 |
⬆️ Upgrade `ln.setup` | [554](https://github.com/laminlabs/lamindb/pull/554) | [falexwolf](https://github.com/falexwolf) | 2023-03-09 |
🔥 Remove `ln.knowledge` <span class="badge badge-warning">Breaking</span> | [552](https://github.com/laminlabs/lamindb/pull/552) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-09 |
➖ Remove bionty as a dependency | [551](https://github.com/laminlabs/lamindb/pull/551) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-09 | 0.32.0rc1

📝 Link FAQ and guide to session and notebook API | [550](https://github.com/laminlabs/lamindb/pull/550) | [falexwolf](https://github.com/falexwolf) | 2023-03-07 |
⬆️ Upgrade lndb | [549](https://github.com/laminlabs/lamindb/pull/549) | [fredericenard](https://github.com/fredericenard) | 2023-03-07 | 0.31.0
⬆️ Upgrade lndb | [548](https://github.com/laminlabs/lamindb/pull/548) | [fredericenard](https://github.com/fredericenard) | 2023-03-07 |
📝 Move ingest-folder back to faq | [545](https://github.com/laminlabs/lamindb/pull/545) | [falexwolf](https://github.com/falexwolf) | 2023-03-06 |
🚸 Improve clarity of `no_source` error message | [543](https://github.com/laminlabs/lamindb/pull/543) | [falexwolf](https://github.com/falexwolf) | 2023-03-06 |
💚 Fix CI | [542](https://github.com/laminlabs/lamindb/pull/542) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-06 |
🚚 Rename data objects to data or datasets in titles | [541](https://github.com/laminlabs/lamindb/pull/541) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-06 |
📝 Duplicate README to the guide landing page | [540](https://github.com/laminlabs/lamindb/pull/540) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-06 |
✨ Allow uploading zarr from local paths | [539](https://github.com/laminlabs/lamindb/pull/539) | [Koncopd](https://github.com/Koncopd) | 2023-03-05 |
📝 Prettify guide landing page | [537](https://github.com/laminlabs/lamindb/pull/537) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-05 |
🚑 Fix upsert for dobject and CI | [535](https://github.com/laminlabs/lamindb/pull/535) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-03 | 0.30.3
💄 Simplify docs | [534](https://github.com/laminlabs/lamindb/pull/534) | [falexwolf](https://github.com/falexwolf) | 2023-03-03 |
🚸 Do not error, just warn upon installation of lamin | [533](https://github.com/laminlabs/lamindb/pull/533) | [falexwolf](https://github.com/falexwolf) | 2023-03-02 | 0.30.2
🚑 Fix iterdir to not list itself | [532](https://github.com/laminlabs/lamindb/pull/532) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-02 |
🔥 Remove `lamin` dependency | [531](https://github.com/laminlabs/lamindb/pull/531) | [falexwolf](https://github.com/falexwolf) | 2023-03-01 | 0.30.1
🚑 Fix for listing cloud dir | [528](https://github.com/laminlabs/lamindb/pull/528) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-01 | 0.30.0
🎨 Add `lamindb.setup` API as an alternative for the CLI | [530](https://github.com/laminlabs/lamindb/pull/530) | [falexwolf](https://github.com/falexwolf) | 2023-03-01 |
🚚 Rename `dfolder.get_dobject` to `get`, allow passing a subdirectory | [527](https://github.com/laminlabs/lamindb/pull/527) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-01 |
🚑 Ensure filepath is absolute | [526](https://github.com/laminlabs/lamindb/pull/526) | [sunnyosun](https://github.com/sunnyosun) | 2023-03-01 |
🎨 Allow passing a list of relpaths to `dfolder.get_dobject` | [524](https://github.com/laminlabs/lamindb/pull/524) | [sunnyosun](https://github.com/sunnyosun) | 2023-02-28 |
✨ Infer filesystem for anndata read and write | [522](https://github.com/laminlabs/lamindb/pull/522) | [Koncopd](https://github.com/Koncopd) | 2023-02-25 |
📝 Replace `lndb` with `lamin` in docs | [521](https://github.com/laminlabs/lamindb/pull/521) | [falexwolf](https://github.com/falexwolf) | 2023-02-25 | 0.29.1
📝 Add nbproject note box to ingest guide | [520](https://github.com/laminlabs/lamindb/pull/520) | [bpenteado](https://github.com/bpenteado) | 2023-02-24 |
🍱 `DFolder.get_dobject` | [519](https://github.com/laminlabs/lamindb/pull/519) | [sunnyosun](https://github.com/sunnyosun) | 2023-02-24 |
⬆️ Upgrade lnschema-core to 0.28.6 | [517](https://github.com/laminlabs/lamindb/pull/517) | [bpenteado](https://github.com/bpenteado) | 2023-02-23 | 0.29.0
💥 Move `lns.DFolder` to `ln.DFolder` | [510](https://github.com/laminlabs/lamindb/pull/510) | [sunnyosun](https://github.com/sunnyosun) | 2023-02-23 |
🐛 Fix trailing slash within lamindb | [516](https://github.com/laminlabs/lamindb/pull/516) | [falexwolf](https://github.com/falexwolf) | 2023-02-22 | 0.28.5
👷 Fix CI config | [515](https://github.com/laminlabs/lamindb/pull/515) | [falexwolf](https://github.com/falexwolf) | 2023-02-22 | 0.28.4
🐛 Fix version check | [514](https://github.com/laminlabs/lamindb/pull/514) | [falexwolf](https://github.com/falexwolf) | 2023-02-22 | 0.28.3
👷 Collect docs artifacts | [513](https://github.com/laminlabs/lamindb/pull/513) | [falexwolf](https://github.com/falexwolf) | 2023-02-22 | 0.28.2
🐛 Fix trailing slash in storage root | [512](https://github.com/laminlabs/lamindb/pull/512) | [falexwolf](https://github.com/falexwolf) | 2023-02-22 | 0.28.1