Amici

* Parallelize matrix simplification
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1778
* Validate PEtab problems before attempting import
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1842
* Improved type annotations for the swig interface
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1860

Fixes:
* Fixed an issue with potentially infinite loops during conservation law
processing by FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1833
* Fixed potential deadlocks during parallel simplification
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1844
* Fix resetting `ReturnData::numstepsB` when re-using Solver
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1841

And further contributions by dilpath, dweindl, FFroehlich

**Full Changelog**:
https://github.com/AMICI-dev/AMICI/compare/v0.11.32...v0.12.0

Features:
* Support for event observables via the Python interface
by FFroehlich in https://github.com/AMICI-dev/AMICI/pull/1845
* Treat non-estimated parameters as constants during SBML-PEtab import
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1810
* Updated SUNDIALS to v5.8.0
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1836
* Option to extract common subexpressions
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1852,
https://github.com/AMICI-dev/AMICI/pull/1856

Fixes:
* Fixed `ImportError`s during package installation with recent setuptools
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1830

Fixes:
* Fixed `ParameterMapping.__getitem__` to either return a
`ParameterMappingForCondition` or a new `ParameterMapping`, but not a list
by dweindl in https://github.com/AMICI-dev/AMICI/pull/1826

Features:
* Allow overriding model name during PySB import by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1801
* Added __repr__ for parameter mapping classes by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1799
* More informative warning messages for NaNs/Infs by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1798
* Moved `sim_steps` increment by plakrisenko in
https://github.com/AMICI-dev/AMICI/pull/1806
* Re-arranged application of parameters from `ExpData` to avoid initial
sensitivities error by dilpath in
https://github.com/AMICI-dev/AMICI/pull/1805
* Checking for unused parameters in `simulate_petab` by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1816
* Add `create_parameter_mapping` kwarg forwarding by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1820

Other
* Remove `constant_species_to_parameters` by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1809

Fixes
* Fixed handling of SBML models given as `pathlib.Path` in
`petab_import.import_model_sbml by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1808
* Fixed missing CPU time reset by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1814
* Raise in `simulate_petab` with `scaled_parameters=True`
`problem_parameters=None` by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1819

...

**Full Changelog**:
https://github.com/AMICI-dev/AMICI/compare/v0.11.29...v0.11.30

What's Changed

Features:
* Performance: Limit newton step convergence check by FFroehlich in
https://github.com/AMICI-dev/AMICI/pull/1780
* More informative NaN/Inf warnings by dweindl in
https://github.com/AMICI-dev/AMICI/pull/1640
* SBML import can now handle initial events by FFroehlich in
https://github.com/AMICI-dev/AMICI/pull/1789

Fixes:
* Avoid error if no measurements in PEtab problem; fixed type handling in
PEtab parameter mapping by dilpath in
https://github.com/AMICI-dev/AMICI/pull/1783
* Fixed substitution of expressions in root and stau by dilpath in
https://github.com/AMICI-dev/AMICI/pull/1784
* Workaround for PEtab problems with state-dependent noise models by dweindl
in https://github.com/AMICI-dev/AMICI/pull/1791

**Full Changelog**: https://github.com/AMICI-dev/AMICI/compare/v0.11.28...v0.11.29