Pysam

Latest version: v0.23.0

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Page 7 of 8

Not secure

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* added Fastafile.references, .nreferences and .lengths
* tabix_iterator now uses kseq.h for python 2.7

Not secure

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* added inferred_length property
* issue 122: MACOSX getline missing, now it works?
* seq and qual can be set None
* added Fastqfile

Not secure

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* switch to samtools 0.1.19
* issue 122: MACOSX getline missing
* issue 130: clean up tempfiles
* various other bugfixes

Not secure

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* further bugfixes to setup.py and package layout

Not secure

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* further bugfixes to setup.py
* upgraded distribute_setup.py to 0.6.34

Not secure

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* bugfix in installer - failed when cython not present
* changed installation locations of shared libraries

Has known vulnerabilities

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