Nextflow

Latest version: v24.10.5

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0.22.2

- Fixed Copy input files to scratch directory 197
- Fixed PBS qsub fails when the job name starts with a dot 228
- Fixed issue when staging-out a symlink output file
- Fixed log warning when running a script in the console

0.22.1

- Fixed Nested symlinks are not resolved by Docker container mounts 222
- Fixed Nextflow execution log fail to get field starting with '%' 223
- Fixed Nextflow console launcher
- Added `ContainerCreation` status to K8S executor
- Expand `=` to `==` in filter expressions to avoid misleading results

0.22.0

- Fixed queue-size attribute for local executor
- Fixed Kubernetes pod id parse issue
- Move `.nextflow.history` and `.cache` files under `.nextflow` directory

0.22.0.rc2

- Fixed File name containing glob wildcards cannot be captured in the process output 219
- Fixed Work dir containing glob wildcards are not supported 194
- Added `revision id` to execution log
- Added `scriptId`, `scriptFile` and `scriptName` attributes to workflow metadata object
- Added time delay penalty on error burst to prevent failing node to drain all pending jobs
- Load classes without creating an instance of each cloud driver
- Improved AWS driver missing credentials error report
- Merged experimental Kubernetes support
- Improved clean and log command
- Added EFS default mount path
- Refactored daemon shutdown

0.22.0.rc1

- Fixed Implement clean up command 19
- Fixed Trace file should include cached tasks 114
- Added ability to log each command run 108
- Added new `cloud` command
- Added AWS EFS support
- Added AWS Spot instance error fail-over
- Added support cloud auto scaling
- Added Ignite job-stealing distributed scheduler

0.21.3

- Fixed Spaces in work directory path stops slurm from accepting the job 218

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