Niworkflows

----------------------
Bug-fix release in the 1.1.x series.

This release contains maintenance actions on the CI infrastructure after
migration to the `NiPreps organization <https://www.nipreps.org>`__.

* FIX: replace mutable ``list`` with ``tuple`` in ANTs' workflow (473)
* MAINT: Pacify security patterns found by Codacy (474)
* MAINT: Miscellaneous housekeeping (472)
* MAINT: Fix test_masks (470)
* MAINT: Use docker-registry for caching on CircleCI (471)
* MAINT: Revise code coverage collection (469)
* MAINT: Transfer to nipreps organization (468)

-------------------------
Bug-fix release in the 1.1.x series.

This release includes some minor improvements to formatting of reports and derivative metadata.

* FIX: Check for valid qform before calculating change (466) effigies
* ENH: Display errors as summary/details elements (464) effigies
* ENH: Add a pure-Python ApplyMask interface, based on NiBabel (463) oesteban
* MAINT: Replace ``os`` operations with ``pathlib``, indent JSON sidecars (467) mgxd

-------------------------
Minor improvements to enable fMRIPrep 20.0.0 release.

* ENH: Revise SpatialReference caching for ease of use, accessibility (461) mgxd
* ENH: Downgrade log level for superfluous scans (460) mgxd
* ENH: Enable optional BIDS entity filtering to data collection utility (407) bpinsard

------------------------
Update NiBabel pinned version.

* MAINT: Update nibabel's pin to >=3.0.1

------------------------
A refactor of recently introduced spaces/references/spatial-references objects,
and some methods for upstream pipelines.

* ENH: Revision of spaces module for consistency (457)
* ENH: Add BIDS output version checker (456)
* ENH: Standard space querying (455)
* ENH: Add cache to ``SpatialReferences`` (453)
* ENH: Add helper function for cleaning a directory (454)
* FIX: Parsing of floats in ``ResampleImageBySpacing`` (452)

------------------------
Minor enhancements to better represent spaces/spatial-references,
and increasing the test coverage of the Reports System (with thanks to J. Kent
for the contribution):

* ENH: Separate ``Space`` and ``SpatialReferences`` (451)
* ENH+TST: Add all valid entities to the default report specification (447)