* Added parameter to disable soft clipping in mapping * Disable softclipping in rRNA filter * Make sure that discarded reads after rRNA filter are replaced by Ns * Improved stats info a bit
0.5.3
* Bumped Taggd to 0.2.2
0.5.2
* Fixed a bug in the rRNA filter that would cause to not discard rRNA mapped reads
0.5.1
* Added check when UMI is the same as barcode * Added more stats * Added percentiles distributiosn stats for createDAtaset * Added support for BAM and SAM (not functional now) * Added option to disable multiple aligned reads * Fixed a bug in the bed file
0.5.0
* Added AT content filter in quality trimming * Added min mapped length filter after mapping * Make sure one of the multiple aligned reads is set as not multiple aligned so it can be annotated * Discard the other multiple aligned reads after mapping * Disable sorting * Restored back to use gene_id as column for annotation
0.4.9
* Changed naming convention * Added support for normal RNA analysis