* Fixed a bug in the molecular barcodes algorithm * Fixed a bug that would keep the original fastq reads in the system * Update taggd version
0.4.3
* Small improvements with error checking and log in the mapping * Fixed a bug that would remove the file after filtering annoted reads * Make the sorting by name instead by position due to a bug in htseq-count
0.4.2
* Fixed a bug in the capture of parameters
0.4.1
* Improved the logs * Fixed few bugs
0.4.0
* Added back taggd * Added BED file to output * Added STAR * Optimized workflow * do rRNA filter first * Optimized annotation * Optimized trimming * Output reads do not contain duplicates
0.3.9
* Allowing molecular barcodes to be before the barcodes