Malariagen-data

What's Changed
* Anopheles diplotype clustering - fix n_snps in title by sanjaynagi in https://github.com/malariagen/malariagen-data-python/pull/561
* Add defaults for min_minor_ac, max_missing_an by leehart in https://github.com/malariagen/malariagen-data-python/pull/569
* Update switcher.json by leehart in https://github.com/malariagen/malariagen-data-python/pull/574
* Add terms-of-use info to sample_metadata() by leehart in https://github.com/malariagen/malariagen-data-python/pull/560
* Fix and improve plotting pairwise average fst by alimanfoo in https://github.com/malariagen/malariagen-data-python/pull/579
* Add clip_min parameter for Fst GWSS analyses by alimanfoo in https://github.com/malariagen/malariagen-data-python/pull/580
* Pandas FutureWarning: Setting an item of incompatible dtype is deprecated by jonbrenas in https://github.com/malariagen/malariagen-data-python/pull/535
* Skip sample sets missing CNV HMM by leehart in https://github.com/malariagen/malariagen-data-python/pull/575


**Full Changelog**: https://github.com/malariagen/malariagen-data-python/compare/v11.0.0...v12.0.0

What's Changed
* Option to annotate upper-right corner of Fst plots with Z scores. by jonbrenas in https://github.com/malariagen/malariagen-data-python/pull/538


**Full Changelog**: https://github.com/malariagen/malariagen-data-python/compare/v10.2.0...v11.0.0

What's Changed
* Add sequence QC metadata to sample_metadata() by leehart in https://github.com/malariagen/malariagen-data-python/pull/549


**Full Changelog**: https://github.com/malariagen/malariagen-data-python/compare/v10.1.0...v10.2.0

What's Changed
* Advanced diplotype clustering by sanjaynagi in https://github.com/malariagen/malariagen-data-python/pull/537
* Advanced diplotype clustering - follow-up by alimanfoo in https://github.com/malariagen/malariagen-data-python/pull/550


**Full Changelog**: https://github.com/malariagen/malariagen-data-python/compare/v10.0.0...v10.1.0

What's Changed
* Pandas FutureWarning: 'A' is deprecated and will be removed in a future version, please use 'Y' instead by jonbrenas in https://github.com/malariagen/malariagen-data-python/pull/529
* Pandas FutureWarning: ChainedAssignmentError: behaviour will change in pandas 3.0 by jonbrenas in https://github.com/malariagen/malariagen-data-python/pull/533
* Bokeh BokehDeprecationWarning: 'circle() method with size value' was deprecated in Bokeh 3.4.0 and will be removed, use 'scatter(size=...) instead' by jonbrenas in https://github.com/malariagen/malariagen-data-python/pull/534
* Update poetry lock file by alimanfoo in https://github.com/malariagen/malariagen-data-python/pull/527
* Add sample_query argument for cnv_discordant_read_calls function by jonbrenas in https://github.com/malariagen/malariagen-data-python/pull/528
* Add automatic selection of regional GCS storage by alimanfoo in https://github.com/malariagen/malariagen-data-python/pull/523
* Updated parasite test buckets from staging to release by nw20 in https://github.com/malariagen/malariagen-data-python/pull/541
* Ensure a site mask is used by default for Anopheles popgen functions by alimanfoo in https://github.com/malariagen/malariagen-data-python/pull/546

New Contributors
* nw20 made their first contribution in https://github.com/malariagen/malariagen-data-python/pull/541

**Full Changelog**: https://github.com/malariagen/malariagen-data-python/compare/v9.0.0...v10.0.0

Release to activate Zenodo integration. No code changes.

**Full Changelog**: https://github.com/malariagen/malariagen-data-python/compare/v9.0.0...v9.0.1