Planemo

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* Template framework for reporting including new markdown and plain
text reporting options for testing - thanks to `hexylena`_.
`Pull Request 304`_
* XUnit style reporting for ``shed_diff`` command - thanks to
`hexylena`_. `Pull Request 305`_
* Add new ``shed_build`` command for building repository tarballs -
thanks to `kellrott`_. `Pull Request 297`_
* Fix exit code handling for ``lint`` commands - thanks to `mvdbeek`_.
`Pull Request 292`_
* Improved documentation for ``serve`` command - thanks to `lparsons`_.
`Pull Request 312`_
* Tiny backward compatible Python 3 tweaks for `Tool Factory`_ - thanks
to `peterjc`_. dad2d9d_
* Fixed detection of virtual environment in ``Makefile`` - thanks to
`lparsons`_. `Pull Request 311`_
* Updates to Galaxy XSD - thanks to `mr-c`_. `Pull Request 309`_
* Allow reading shed key option from an environment variable.
`Pull Request 307`_
* Allow specifying host to serve Galaxy using ``-host`` - thanks in
part to `chambm`_. `Pull Request 301`_
* Allow specifying defaults for ``-host`` and ``--port`` in
``~/.planemo.yml``. `Pull Request 301`_
* Improve ``~/.planemo.yml`` sample comments - thanks to `martenson`_.
`Pull Request 287`_
* Update tool shed categories - thanks to `bgruening`_. `Pull Request 285`_
* Improved output readibility for ``diff`` command - thanks to `martenson`_. `Pull Request 284`_

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* Allow ``-t`` as shorthand for ``--shed_target`` (thanks to Peter Cock).
`Pull Request 278`_
* Fix ``tool_init`` command to use ``from_work_dir`` only if file in command
(thanks to bug report and initial fix outline by Gildas Le Corguillé).
`Pull Request 277`_
* Various documentation fixes (thanks in part to Peter Cock and Daniel
Blankenberg). `Pull Request 256`_, `Pull Request 253`_, `Pull Request 254`_,
`Pull Request 255`_, `Pull Request 251`_, `Issue 272`_

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* Fix project_init for missing files. cb5b906_
* Various documentation improvements.

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* Fix for ``shed_init`` producing non-standard type hints. `Issue 243`_,
f0610d7_
* Fix tool linting for parameters that define an ``argument`` but not a
``name``. `Issue 245`_, aad1eed_
* Many doc updates including a tutorial for developing tools in a test-driven
fashion and instructions for using the planemo appliance through Kitematic
(with Kitematic screenshots from E. Rasche).

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* If planemo cannot find a Galaxy root, it will now automatically fetch
one (specifing ``--galaxy_install`` will still force a fetch).
`Pull Request 235`_
* `Docuementation <http://planemo.readthedocs.org/en/latest/appliance.html>`__
has been updated to reflect new and vastly improved Docker and Vagrant
virtual appliances are now available, as well as a new VirtualBox OVA
variant.
* Update linting for new tool XML features (including ``detect_errors``
and output collections). `Issue 233`_, 334f2d4_
* Fix ``shed_test`` help text. `Issue 223`_
* Fix code typo (thanks to Nicola Soranzo). `Pull Request 230`_
* Improvements to algorithm used to guess if an XML file is a tool XML file.
`Issue 231`_
* Fix configuration file handling bug. `Issue 240`_

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* Fix ``shed_test`` and ``shed_serve`` for test and local tool sheds.
f3cafaa_

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