Fmriprep

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1.3.1

---------------------
Updated ecosystem's versions (TemplateFlow 0.1.x, Niworkflows 0.8.x, and sMRIPrep 0.1.x)
to include latest improvements (bugfixes from niworkflows and the new pybids interface
of templateflow).
TemplateFlow 0.1.0 does not require datalad anymore.
With thanks to franklin-feingold for contributions.

* UX: Reduce warning levels (1513) effigies
* DOC: ``fmriprep-docker`` documentation (1515) franklin-feingold
* REL: 1.3.1 (1527) oesteban

1.3.0.post3

---------------------------
Hotfix release intended for Docker users, smoothing the experience of TemplateFlow
when using the ``-u UID`` flag is necessary.

* FIX: Orientation problem with niworkflows<0.7.2 (nipreps/niworkflows312) effigies
* ENH: TemplateFlow + ``docker run -u ...`` (1525) oesteban
* ENH: Include repetition time in functional summary (1508) wiheto
* FIX: Do not crash if all aroma components are classified as noise (1467) jdkent

1.3.0.post2

-------------------------------
Hotfix release intended for Singularity users, amending the previous iteration
that didn't fix the problem (1510) effigies.

1.3.0.post1

------------------------------
Hotfix release intended for Singularity users. For further detail, please see
`1500 <https://github.com/nipreps/fmriprep/issues/1500>`__.

1.3.0

------------------------
We start the 1.3.x series including a few bugfixes, housekeeping duty and a refactors
to leverage `sMRIPrep <https://github.com/nipreps/smriprep>`__ (which is a fork of
fMRIPrep's anatomical workflow), pybids>=0.7 for querying dataset, and
`TemplateFlow <https://github.com/templateflow>`__ for handling standard spaces.

* FIX: Bad ``fsnative`` replacement in CIfTI workflow (1476) oesteban
* FIX: Avoid warning when generating boilerplate (1464) oesteban
* MAINT: resolves 1485 : patch fmriprep-docker automount for use with Python 3.7 (1486) rciric
* RF: Use anatomical workflows from sMRIPrep (1482) oesteban
* MAINT: Update sentry-sdk (1490) chrisfilo
* ENH: Remaining TemplateFlow integrations (1494) oesteban
* MAINT: Update to keep up with nipreps/niworkflows299 (1496) oesteban
* FIX: Updating bids-validator to 1.1.3 (1498) chrisfilo

1.2.x series (January 2019)
===========================

1.2.61

--------------------------
Hotfix release of version 1.2.6, pinning niworkflows to a release version (instead
of the development branch, since 1459) and including to bugfixes.

* PIN: NiWorkflows 0.5.2.post7 (`1bf4a21 <https://github.com/nipreps/fmriprep/commit/1bf4a21cce62c4330510a9a8ae50db876fbc23b0>`__).
* FIX: Bad ``fsnative`` replacement in CIfTI workflow (1476) oesteban
* FIX: Avoid warning when generating boilerplate (1464) oesteban

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