Resolwe

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Changed
-------
- Renamed ``workflow-trim-align-quant`` workflow to make the name more
informative


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===================

Added
-----
- Add ``Macaca mulatta`` species choice to the ``sample`` descriptor
schema
- Add ``workflow-cutadapt-star-fc-quant-wo-depletion-single`` process

Changed
-------
- Test files improved for ``workflow-wes``, ``bamclipper``,
``markduplicates`` and ``bqsr``
- Fix typo in ``differentialexpression-shrna`` process docstring

Fixed
-----
- Fix transcript-to-gene_id mapping for Salmon expressions in
``differentialexpression-deseq2`` process. Transcript versions are
now ignored when matching IDs using the transcript-to-gene_id mapping
table.
- Fix ``workflow-cutadapt-star-fc-quant-single`` process description


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Fixed
-----
- Fix ordering options in Data viewset to enable ordering by ``process__name``
and ``process__type``
- Handle exception when processing deleted Data object

Changed
-------
- **BACKWARD INCOMPATIBLE:** Delete ``elastic`` application
- Don't pass undefined values to steps of workflows

Added
-----
- Add relations property to ``data:`` and ``list:data:`` fields to support
relations on client
- Add ``entity_id`` property do ``DataField`` in Python processes
- Add relations in Python processes


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===================

Fixed
-----
- When deciding which StorageLocation objects will be deleted consider only
completed StorageLocation objects.
- Add ``google.resumable_media.common.DataCorruption`` exception to
``transfer_exceptions`` tuple.


===================

===================

Fixed
-----
- Celery sometimes starts more than one worker for a given Data object. In
such case the download and purge part of the worker must be skipped or
errors processing Data objects might occur.


===================

===================

Changed
-------
- Remove ``asgiref`` version pin due to new release that fixed previous
regression.


===================