Bokeh

--------------------
* bugfixes:
- 5420 [component: bokehjs] View.classname doesn't respect class structure
- 6655 [component: bokehjs] X/y_range not properly set with tile source
- 6680 [component: bokehjs] Datetime (convert_datetime_type) seems to add in extra milliseconds
- 6932 [layout] 0.12.9 misplaced figure title
- 7083 [component: bokehjs] Factorrange regression: plot does not get updated when factors change
- 7101 [component: bokehjs] [widgets] Broken datatable selecteditor
- 7139 [component: bokehjs] [regression] [widgets] Datatable automatically scrolls down when app loads
- 7218 [component: bokehjs] Circle not circular
- 7266 [layout] [regression] Spacer does not display using show on 0.12.11
- 7290 [component: bokehjs] Regression in boxzoomtool with match_aspect
- 7291 [component: bokehjs] Hovertool with attachment="vertical" incorrectly positions tooltips
- 7295 [component: docs] Removed a broken link from server.rst
- 7298 Remove dependency on phantomjs when other webdriver is used
- 7304 [component: bokehjs] [regression] [widgets] Datatable editing regression
- 7319 [notebook] Themes not applying in the notebook
- 7327 Output_png and output_svgs fails in the settings.phantomjs_path( ) function.
- 7337 [component: bokehjs] Legend entry for text renderer causes error
- 7370 [component: bokehjs] Regression in graph rendering during zoom
- 7373 [component: bokehjs] [regression] "number.isinteger()" javascript error of slider in internet explorer
- 7386 [component: docs] Error in documentation for handling categorical data
- 7398 [component: bokehjs] [regression] [typescript] Missing import of includes function in tile_renderer
- 7400 Issue with figure and legend when a dataframe is passed as a source
- 7412 [component: bokehjs] [typescript] Variables in widget selectview undeclared
- 7439 [component: bokehjs] [notebook] [regression] Regression displaying embedded bokeh plots outside the notebook
- 7443 [component: bokehjs] [layout] [regression] Bokeh layout elements overlap in new version
- 7448 [component: bokehjs] [regression] [typescript] "typeerror: hits.map is not a function" when hovering over multiline
- 7452 [component: bokehjs] [regression] [widgets] Revert nouislider rev update
- 7460 Bokeh.core.properties.datetransform fails on windows
- 7461 [component: server] [regression] Unable to reuse sessions of a server application
- 7470 [component: bokehjs] Polydrawtool does not emit event on double-click
- 7475 [component: bokehjs] [regression] Setting range end or start through customjs not working
- 7478 [component: bokehjs] [regression] Selection and nonselection glyph properties ignored
- 7484 [regression] Cannot select tools in certain examples
- 7488 [component: bokehjs] [regression] Renderers/glyph_renderer contains invalid syntax
- 7503 [component: bokehjs] [regression] [widgets] Selecteditorview (and others) doesn't have access to its model
* features:
- 6370 [component: bokehjs] Proposing a bokeh draw tool
- 7292 [API: models] Make it possible to create hovertool with attachment set to explicit left, right, above, below
* tasks:
- 3250 [component: bokehjs] Tool icons should have the same dimensions
- 3551 Add https to tile providers urls in `bokeh/tile_providers.py`
- 6605 [component: bokehjs] [component: build] Add support for tslint in bokehjs' build
- 6681 [component: server] Streaming numpy datetime64 data does not work
- 6887 Remove all server examples that use session.loop_until_closed
- 7014 [component: bokehjs] The inherited width should be set to 100% and up to the user to implement margin and padding restrictions
- 7084 [component: bokehjs] Factorrange regression: bokehjs crashes if data has values not in factorrange factors
- 7164 [component: tests] Axes labels misplaced on multiple extra_x_ranges
- 7267 [component: bokehjs] [component: build] Make bokehjs' build work with npm 5
- 7288 404 error on website page for releases
- 7289 [component: server] Sort application names in index page
- 7308 [component: server] Tornado 5.0 compatibility
- 7318 [component: docs] Make old/dev docs warning banner always float
- 7323 [component: docs] Components not working with notebook show in the same cell
- 7331 [component: tests] Replace strict fp equality with allclose
- 7332 [component: bokehjs] [layout] Initialize box's layout variables in initialize()
- 7344 [component: docs] Minor typos in bokeh server docs code example
- 7346 [component: tests] Resolve pytest --log-file conflict
- 7354 [component: bokehjs] Remove resettool.reset_size
- 7376 Add traceback information to exception messages callbacks
- 7385 [component: docs] Fixed a broken link ('why anaconda')
- 7391 [component: bokehjs] Multi-gesture tools do not work on proxytoolbar
- 7405 Icons have various visual artifacts
- 7420 [component: bokehjs] [component: build] [typescript] Move gloo2 to its own repository
- 7426 [notebook] Allow push_notebook() to run when no change has occurred
- 7431 [component: bokehjs] [typescript] Remove attrs from hasprops.initialize()
- 7434 [component: docs] Remove references to autoload_server() from the docs
- 7455 [component: docs] State and check min phantomjs version
- 7458 [component: build] Update version number in package-lock.json
- 7500 [component: examples] Expand elements example with tooltip

--------------------
* bugfixes:
- 7283 [component: build] Windows install fails 0.12.12

--------------------
* bugfixes:
- 6588 [typescript] Model references are not resolved when trying to change ranges and attach js callback at the same time
- 7268 [component: bokehjs] [notebook] Push_notebook regression in 0.12.11
- 7282 [component: bokehjs] Add missing return statements to get_indices typescript version
* tasks:
- 7214 [component: bokehjs] [component: build] Allow es6 output from bokehjs' build
- 7276 Unclear exception when bokeh_log_level env variable is set to a wrong value
- 7279 [component: docs] Configuring plot tools documentation was unclear

--------------------
* bugfixes:
- 1376 [component: bokehjs] [widgets] Implement `widget.disabled`
- 1651 [layout] Grid plot with row of all none behaves badly
- 3538 [component: server] Session could auto-no-op any callbacks invoked after the session is destroyed
- 4561 [layout] Models/legends example broken
- 4574 [layout] [regression] Plot border gets covered up by things stuck on edge
- 4613 Hover tool has own column in ie
- 4787 [layout] [widgets] Erroneous toolbar separator positions using tabs
- 5761 [layout] Location in colorbar offsets from axis
- 6065 [component: bokehjs] Touch events fail in device mode under chrome devtools
- 6348 [layout] Layouts with multiple tab widgets don't work
- 6409 [component: server] Screen distance spec fields fail with bokeh.client
- 6466 [component: bokehjs] [layout] Rendering error with toolbar_sticky=false and sizing_mode='scale_width'
- 6502 [widgets] Programmatically setting the active tab does not change the tab in 0.12.6 & 0.12.7
- 6545 Patch bug: patch slices must have positive (start, stop, step) values, got slice(0, 200, 50)
- 6583 [component: bokehjs] Rect not behaving correctly with zero height
- 6600 [component: build] Downloading dependencies from scripts/deps fails
- 6676 [layout] [regression] Axes' tick labels are trimmed when moving plot
- 6841 [component: bokehjs] [regression] [widgets] Rangeslider css_classes not being updated anymore
- 6946 [component: bokehjs] Graphrenderer view not updating
- 7060 [layout] [regression] Twin_axis not showing label correctly in version 0.12.9
- 7062 [component: bokehjs] Linked brushing does not work on second plot in gridplot
- 7075 [layout] Changing title attributes does not work as expected in bokeh server
- 7121 [component: docs] Documentation - typo in release file 0.12.10
- 7128 [component: server] [regression] When embeding bokeh server to flask, attributeerror: 'nonetype' object has no attribute '_id' shows up
- 7162 [component: docs] Fix documentation for properties.rgb
- 7184 [component: server] [regression] Support stream and update with pandas dataframes
- 7189 [component: bokehjs] Hovertool data not completely matching when using cdsview filters in bokeh 0.12.11dev2
- 7193 [component: bokehjs] [regression] Ion slider extension example broken
- 7199 [component: bokehjs] Missing import of logger in toolbar.coffee
- 7202 [layout] Layout of plot border with axis.visible = false
- 7212 [component: bokehjs] [notebook] [regression] Ie11-incompatible syntax in bokeh/core/_templates/autoload_nb_js.js?
- 7213 [component: bokehjs] Canvas image smoothing in ie11
- 7222 Double encode escapes in html-safe json strings
- 7224 [component: bokehjs] [regression] `sdy` in range info is inverted and affects panning gmaps
- 7230 [component: examples] Spectrogram example image broken
- 7240 [component: docs] Missing figure import on graph example
- 7250 [component: bokehjs] [widgets] Slider callback doesn't occur on particular values
- 7255 [component: bokehjs] [regression] Zooming performance regression in 0.12.11rc
* features:
- 1007 [component: docs] Documenting the documentation process and guidelines
- 3644 [component: bokehjs] Would need a figure.step to create step line in plot
- 4635 [layout] Right titles are too far out
- 4711 Decorator for documenting what version a function or method first appeared
- 5298 Box select does not work with vbar but tap tool does
- 5937 [component: bokehjs] Lod in linked plots
- 6565 [component: server] Avoid boiler-plate when constructing a bokeh server programmatically
- 6599 Bokeh server url hard coded as over http
- 7130 [component: bokehjs] [bokekjs] unable to use customjs in bokehjs
- 7150 [component: bokehjs] [widgets] Adding optgroup functionality to select widget
* tasks:
- 4394 [layout] Axis label size change does not trigger a re-alignment
- 4874 [layout] Toolbar css class occasionally is `bk-toolbar-null`
- 5648 [API: models] Line renderer raises the "without value specification" when a columndatasource is used
- 6174 [component: bokehjs] Hovertool vline/hline models for line glyph (_hit_span method) causes non-intuitive tooltips to appear
- 6447 [layout] Switch layout's coordinate system from view to screen
- 6626 [component: docs] Updates to /docs/dev_guide/setup.html
- 6990 [component: bokehjs] [layout] Allow toolbar in side panels and drop sticky property
- 7028 Gmaps incompatible with datarange1d, make error louder/earlier
- 7039 [component: docs] Clarify some security considerations
- 7053 [component: examples] [component: tests] Plotting/file/categorical_scatter_jitter needs a seed
- 7081 [component: docs] User guide still refers to bokeh.embed.notebook_div
- 7096 [component: docs] Typo in server.rst
- 7100 [component: docs] Renamed custom attribute from range to slider
- 7103 [component: docs] Update bokehjs standalone installation guidelines
- 7104 Bokeh channel version of nodejs is no longer in sync with upstream anaconda/nodejs
- 7114 [component: bokehjs] Add wheelpantool support to bokehjs
- 7131 Prove of concept: caching of nodejs compilation on model bundling
- 7154 [typescript] Investigate coffeescript 2 and its benefits for transition to typescript
- 7172 [component: docs] Extending bokeh with js library documentation needs to clarify use of javascript() to wrap js
- 7179 [component: docs] Zeppelin notebook integration not working
- 7181 [component: tests] Move annotations' "integration" tests to examples
- 7190 [component: docs] Legend text with click_policy="hide"
- 7198 [component: docs] Request for improvement to columndatasource documentation in reference to multi_line()
- 7200 [component: docs] Adding additional information in the multi_line() documentation
- 7207 [component: docs] Add kwargs documentation for directoryhandler
- 7229 [component: docs] Multiprocessing in windows is not available (error:module 'os' has no attribute 'fork')
- 7236 [component: examples] Simplify brewer.py example

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* bugfixes:
- 4247 [notebook] Performance issues after repeated `push_notebook` calls
- 4965 Datepicker errors on input from chrome on windows 8.1
- 5415 [notebook] Having multiple `push_notebook` calls in the same widget callback doesn't work
- 5452 [notebook] Plotting bug when using push_notebook() from customjs callback
- 6258 [regression] Colorspec processing is broken
- 6590 [component: server] Tile sources cannot be shared between app sessions
- 6820 [component: bokehjs] Cdsview not working with text glyph
- 6831 [component: examples] [regression] Color slider example can show hex fp values
- 6846 [component: bokehjs] Categories on yaxis with hbar fails to set initial ranges
- 6863 [component: server] Datatables do not update properly for on_change events 0.12.7
- 6891 [component: bokehjs] [regression] Customjs for hover no longer working - bokeh 0.12.7
- 6910 [component: bokehjs] The new feature filter (cdsview) not behaving has expected
- 6921 [component: bokehjs] [notebook] [regression] Shared drag tools in grid plots only work on the last plot
- 6926 [component: bokehjs] Daterangeslider incorrect value displayed
- 6947 [component: bokehjs] Color mapping in circle fill colors does not take current view (cdsview) into account
- 6949 [component: bokehjs] Length_units has no effect for rays
- 6955 Possible bug: hover tool does not work with filtered source
- 6982 [component: bokehjs] Bugfix: bokeh-server: ie fails with "object doesn't support this action"
- 6986 [component: bokehjs] Mercatorticker behavior poorly defined for ranges exceeding mercator bounds
- 6993 [component: bokehjs] [regression] Bad positioning of colorbar for 'above' and 'below'
- 7015 [component: bokehjs] [regression] Functickformatter broken with categorical axis
- 7035 [component: bokehjs] [regression] [widgets] Datatable with dynamic number of rows is unstable and breaks
- 7044 [component: server] Bokeh server sessions not released correctly
- 7048 [component: bokehjs] Datepicker returns one day earlier than picked in ie
* features:
- 3601 [component: bokehjs] Patchesview._mask_data() changes the draw order
- 4117 [component: bokehjs] Add support for client side filtering of data sources
- 4911 Updating two glyphs using periodic callback
- 6945 [component: bokehjs] [component: server] [notebook] Use bokeh protocol to implement push_notebook
- 6951 Y_range doesn't understand numpy arrays
* tasks:
- 4049 [component: docs] Improve documentation to support running unit tests locally
- 6666 [component: docs] [component: examples] Update sliders in examples
- 6704 [component: bokehjs] Hovertool hit detection fails on vertical and near-vertical segment glyphs
- 6718 [notebook] Push_notebook updates at most one plot
- 6918 [component: docs] Js code error in documentation
- 6928 [component: docs] Bryanv/cleanups
- 6937 [component: docs] Fix typo in notebook.rst
- 6938 Stop computing unused and expensive bokeh.__base_version__
- 6943 [component: docs] Fix docstrings
- 6952 Canonicalize bokeh.client
- 6957 [component: docs] Generate uuids for sphinx docs js script names
- 6962 [component: docs] Gridplot doctext formatting error
- 6971 From_networkx fails with networkx 2.0
- 6978 Passing an index for factors throws value error
- 6991 [component: docs] Out of date reference to matplotlib in user guide for color bars?
- 6994 Canonicalize bokeh.colors
- 6999 [component: docs] Incomplete docs re embedding when using data tables
- 7009 [component: tests] Reduce size of travis ci logs
- 7016 Fix codebase issues
- 7021 Canonicalize more top level modules
- 7022 Clean up sampledata
- 7029 [component: examples] Fixed url typo in examples app & changed readme url to https
- 7031 [component: docs] Server docs are misleading
- 7033 [component: docs] `bokeh-demos` link doesn't exist
- 7041 Changed to handle nx2 scale "kwarg error
- 7052 [component: build] Upgrade typescript to version 2.5.3
- 7056 [component: bokehjs] Remove bk-logo-{medium,large}