Removed a second unneeded viral check from `dark/taxonomy.py`.
4.0.22
Not secure
Removed unneeded viral check from `dark/taxonomy.py`. Added 'generic' as a pathogen type for protein reporting (in `dark/civ/proteins.py`) and that can be given to `bin/proteins-to-pathogens-civ.py`.
4.0.21
Not secure
Added `matchAmbiguous` option to `edlibAlign`.
4.0.20
Not secure
Fixed `simple-consensus.py` argument error that shouldn't have been committed.
4.0.19
Not secure
Added `edlib` alignment method.
4.0.18
Not secure
Changed simple-consensus.py to use 'N' for no coverage and 'n' for low coverage. Fixed issue with hard-clipped bases in CIGAR strings.