Removed `gb2seq` aligner options from `bin/sam-coverage-depth.py`. Bumped major version number seeing as this will break things. I highly doubt anyone is using the removed option. I (Terry) put it in for Christian Gabriel and Annika Beyer during SARS-CoV-2 times.
4.0.89
Allow for `minWindow` to be `None` in `window-split-alignment.py`.
4.0.88
Added `bin/window-split-alignment.py` to split a FASTA alignment into windowed sequences.
4.0.87
Added `stdout` and `stderr` options to `dark.process.Executor` to allow for simple printing of executed commands and their outputs.